dae.tools package
=================

Submodules
----------

dae.tools.cnv\_liftover module
------------------------------

.. automodule:: dae.tools.cnv_liftover
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.dae2vcf module
------------------------

.. automodule:: dae.tools.dae2vcf
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.dae\_liftover module
------------------------------

.. automodule:: dae.tools.dae_liftover
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.denovo2vcf module
---------------------------

.. automodule:: dae.tools.denovo2vcf
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.denovo\_liftover module
---------------------------------

.. automodule:: dae.tools.denovo_liftover
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.draw\_pedigree module
-------------------------------

.. automodule:: dae.tools.draw_pedigree
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.generate\_common\_report module
-----------------------------------------

.. automodule:: dae.tools.generate_common_report
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.generate\_denovo\_gene\_sets module
---------------------------------------------

.. automodule:: dae.tools.generate_denovo_gene_sets
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.gpf\_convert\_study\_config module
--------------------------------------------

.. automodule:: dae.tools.gpf_convert_study_config
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.gpf\_validation\_runner module
----------------------------------------

.. automodule:: dae.tools.gpf_validation_runner
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.grr\_cache\_repo module
---------------------------------

.. automodule:: dae.tools.grr_cache_repo
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.ped2ped module
------------------------

.. automodule:: dae.tools.ped2ped
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.simple\_study\_import module
--------------------------------------

.. automodule:: dae.tools.simple_study_import
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.to\_gpf\_gene\_models\_format module
----------------------------------------------

.. automodule:: dae.tools.to_gpf_gene_models_format
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.vcf2tsv module
------------------------

.. automodule:: dae.tools.vcf2tsv
   :members:
   :undoc-members:
   :show-inheritance:

dae.tools.vcf\_liftover module
------------------------------

.. automodule:: dae.tools.vcf_liftover
   :members:
   :undoc-members:
   :show-inheritance:

Module contents
---------------

.. automodule:: dae.tools
   :members:
   :undoc-members:
   :show-inheritance: