gain.annotation package
=======================

Submodules
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gain.annotation.annotatable module
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.. automodule:: gain.annotation.annotatable
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gain.annotation.annotate\_columns module
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.. automodule:: gain.annotation.annotate_columns
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gain.annotation.annotate\_doc module
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.. automodule:: gain.annotation.annotate_doc
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gain.annotation.annotate\_utils module
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.. automodule:: gain.annotation.annotate_utils
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gain.annotation.annotate\_vcf module
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.. automodule:: gain.annotation.annotate_vcf
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gain.annotation.annotation\_config module
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.. automodule:: gain.annotation.annotation_config
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gain.annotation.annotation\_factory module
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.. automodule:: gain.annotation.annotation_factory
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gain.annotation.annotation\_genomic\_context\_cli module
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.. automodule:: gain.annotation.annotation_genomic_context_cli
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gain.annotation.annotation\_pipeline module
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.. automodule:: gain.annotation.annotation_pipeline
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gain.annotation.annotator\_base module
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.. automodule:: gain.annotation.annotator_base
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gain.annotation.chrom\_mapping\_annotator module
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.. automodule:: gain.annotation.chrom_mapping_annotator
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gain.annotation.cnv\_collection\_annotator module
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.. automodule:: gain.annotation.cnv_collection_annotator
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gain.annotation.debug\_annotator module
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.. automodule:: gain.annotation.debug_annotator
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gain.annotation.docker\_annotator module
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.. automodule:: gain.annotation.docker_annotator
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gain.annotation.effect\_annotator module
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.. automodule:: gain.annotation.effect_annotator
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gain.annotation.gene\_score\_annotator module
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.. automodule:: gain.annotation.gene_score_annotator
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gain.annotation.gene\_set\_annotator module
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.. automodule:: gain.annotation.gene_set_annotator
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gain.annotation.liftover\_annotator module
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.. automodule:: gain.annotation.liftover_annotator
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gain.annotation.normalize\_allele\_annotator module
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.. automodule:: gain.annotation.normalize_allele_annotator
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gain.annotation.processing\_pipeline module
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.. automodule:: gain.annotation.processing_pipeline
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gain.annotation.record\_to\_annotatable module
----------------------------------------------

.. automodule:: gain.annotation.record_to_annotatable
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gain.annotation.score\_annotator module
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.. automodule:: gain.annotation.score_annotator
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gain.annotation.simple\_effect\_annotator module
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.. automodule:: gain.annotation.simple_effect_annotator
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gain.annotation.utils module
----------------------------

.. automodule:: gain.annotation.utils
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Module contents
---------------

.. automodule:: gain.annotation
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