GPF: Genotypes and Phenotypes in Families
  • GPF User Interface
  • GPF Administration
  • GPF Development
    • Release Notes
    • dae Interface
      • Genomic Resources
      • Annotation
      • Effect Annotation
      • Genomic Variants
      • Pedigrees Tools
      • Variants Loaders
      • Import Tools
      • Genotype Data Parquet Writers
        • dae.parquet package
        • dae.parquet.schema2 package
      • Query Genomic Variants
      • Genotype Storage
      • In-Memory Genotype Storage
      • Configuration
      • Genotype Data
      • Phenotype Data
      • Phenotype tool
      • Enrichment Tool
      • dae
    • wdae Interface
GPF: Genotypes and Phenotypes in Families
  • GPF Development
  • dae Interface
  • Genotype Data Parquet Writers
  • View page source

Genotype Data Parquet Writers

  • dae.parquet package
    • Subpackages
      • dae.parquet.schema2 package
    • Submodules
    • dae.parquet.helpers module
      • merge_parquets()
      • url_to_pyarrow_fs()
    • dae.parquet.parquet_writer module
      • add_missing_parquet_fields()
      • append_meta_to_parquet()
      • collect_pedigree_parquet_schema()
      • fill_family_bins()
      • merge_variants_parquets()
      • pedigree_parquet_schema()
      • save_ped_df_to_parquet()
      • serialize_summary_schema()
    • dae.parquet.partition_descriptor module
      • PartitionDescriptor
    • Module contents
  • dae.parquet.schema2 package
    • Submodules
    • dae.parquet.schema2.parquet_io module
      • ContinuousParquetFileWriter
      • VariantsParquetWriter
    • dae.parquet.schema2.serializers module
      • AlleleParquetSerializer
      • JsonVariantsDataSerializer
      • VariantsDataAvroSerializer
      • VariantsDataSerializer
      • construct_avro_family_schema()
      • construct_avro_summary_schema()
    • Module contents
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