dae.query_variants.sql package

Subpackages

• dae.query_variants.sql.schema2 package
  • Subpackages
    • dae.query_variants.sql.schema2.tests package
      • Submodules
      • dae.query_variants.sql.schema2.tests.test_query_builders module
      • dae.query_variants.sql.schema2.tests.test_sql_query_builder module
      • dae.query_variants.sql.schema2.tests.test_sql_query_builder_duckdb module
      • dae.query_variants.sql.schema2.tests.test_sql_query_builder_duckdb_with_partitions module
      • Module contents
  • Submodules
  • dae.query_variants.sql.schema2.base_query_builder module
    • BaseQueryBuilder
      • BaseQueryBuilder.GENE_REGIONS_HEURISTIC_CUTOFF
      • BaseQueryBuilder.GENE_REGIONS_HEURISTIC_EXTEND
      • BaseQueryBuilder.MAX_CHILD_NUMBER
      • BaseQueryBuilder.QUOTE
      • BaseQueryBuilder.WHERE
      • BaseQueryBuilder.build_query()
    • Dialect
      • Dialect.add_unnest_in_join()
      • Dialect.array_item_suffix()
      • Dialect.build_array_join()
      • Dialect.build_table_name()
      • Dialect.escape_char()
      • Dialect.escape_quote_char()
      • Dialect.float_type()
      • Dialect.int_type()
      • Dialect.use_bit_and_function()
  • dae.query_variants.sql.schema2.base_variants module
    • SqlSchema2Variants
      • SqlSchema2Variants.RUNNER_CLASS
      • SqlSchema2Variants.build_family_variants_query_runner()
      • SqlSchema2Variants.build_person_set_collection_query()
      • SqlSchema2Variants.build_summary_variants_query_runner()
      • SqlSchema2Variants.query_summary_variants()
      • SqlSchema2Variants.query_variants()
  • dae.query_variants.sql.schema2.family_builder module
    • FamilyQueryBuilder
  • dae.query_variants.sql.schema2.sql_query_builder module
    • Db2Layout
      • Db2Layout.db
      • Db2Layout.family
      • Db2Layout.meta
      • Db2Layout.pedigree
      • Db2Layout.study
      • Db2Layout.summary
    • SqlQueryBuilder
      • SqlQueryBuilder.GENE_REGIONS_HEURISTIC_CUTOFF
      • SqlQueryBuilder.GENE_REGIONS_HEURISTIC_EXTEND
      • SqlQueryBuilder.REGION_BINS_HEURISTIC_CUTOFF
      • SqlQueryBuilder.build_family_variants_query()
      • SqlQueryBuilder.build_summary_variants_query()
  • dae.query_variants.sql.schema2.summary_builder module
    • SummaryQueryBuilder
  • Module contents

Module contents