gene_view package

Subpackages

• gene_view.tests package
  • Submodules
  • gene_view.tests.test_gene_view module
    • test_gene_view_api_permissions()
    • test_gene_view_config()
    • test_gene_view_summary_variants_download()
    • test_gene_view_summary_variants_download_group()
    • test_gene_view_summary_variants_query()
    • test_gene_view_summary_variants_query_group()
    • test_query_gene_view_summary_variants_dataset()
    • test_query_gene_view_summary_variants_download_dataset()
    • test_query_gene_view_summary_variants_download_study()
    • test_query_gene_view_summary_variants_study()
  • Module contents

Submodules

gene_view.urls module

gene_view.views module

class gene_view.views.ConfigView

Bases: QueryBaseView, DatasetAccessRightsView

Gene browser config view.

get(request: Request) → Response

Get gene browser config.

class gene_view.views.DownloadSummaryVariantsView

Bases: QueryBaseView

Summary download view.

DOWNLOAD_LIMIT = 10000

generate_variants(data: dict, user: User, dataset: WDAEAbstractStudy) → Generator[str, None, None]

Summary variants generator.

post(request: Request) → Response | FileResponse

Summary variants download.

class gene_view.views.QuerySummaryVariantsView

Bases: QueryBaseView

Gene view summary variants view.

post(request: Request) → Response

Query gene view summary variants.

Module contents